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Neurologger
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Neurologger 2/2A/2B
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Neurologger 3
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Optogenetics
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3D Animal Tracking
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Links
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Institute of Neuroinformatics
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University of Zürich
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Anuncibay Soto B, Ma Y, Nollet M, Wong S, Miracca G, Rastinejad D, Yustos R, Vyssotski AL, Franks NP, Wisden W. (2025) The locus coeruleus maintains core body temperature and protects against hypothermia during dexmedetomidine-induced sedation.
Proc Natl Acad Sci USA. 2025 Oct 14;122(41):e2422878122. doi: 10.1073/pnas.2422878122.
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[Supplementary Materials]
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Pijnacker R, Allocca G, Vyssotski AL, Meerlo P, van Hasselt SJ. (2025)
Wintering Barnacle Geese Exhibit an Increased Behavioural Drive for Sleep After Sleep Deprivation Without a Clear EEG-Based Sleep Rebound. J Sleep Res. 2025 Oct 6:e70221. doi: 10.1111/jsr.70221.
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[Supplementary Materials]
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van Hasselt SJ, Martinez-Gonzalez D, Mekenkamp GJ, Vyssotski AL, Verhulst S, Beckers GJL, Rattenborg NC, Meerlo P. (2025) Sleep pressure causes birds to trade asymmetric sleep for symmetric sleep. Curr Biol. 2025 Apr 21;35(8):1918-1926.e3. doi: 10.1016/j.cub.2025.03.008.
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[Supplementary Materials]
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Perinot E, Rewald OM, Fritz J, Nobile MS, Vyssotski A, Ruf T, Fusani L, Voelkl B. (2024) Small energy benefits of in-wake flying in long-duration migratory flights. Proc Biol Sci. 2024 Jan;291(2030):20241173. doi: 10.1098/rspb.2024.1173.
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Conners MG, Green JA, Phillips RA, Orben RA, Cui C, Djuric PM, Heywood E, Vyssotski AL, Thorne LH. (2024) Dynamic soaring decouples dynamic body acceleration and energetics in albatrosses. J Exp Biol. 2024 Sep 15;227(18):jeb247431. doi: 10.1242/jeb.247431.
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[Supplementary Materials]
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EFSA Panel on Animal Health and Welfare (AHAW); Nielsen SS, Alvarez J, Bicout DJ, Calistri P, Canali E, Drewe JA, Garin-Bastuji B, Gonzales Rojas JL, Gortázar C, Herskin MS, Miranda Chueca MÁ, Padalino B, Roberts HC, Spoolder H, Stahl K, Velarde A, Winckler C, Viltrop A, Martin J, Raj M, Vyssotski A, Van der Stede Y, Vitali M, Manakidou A, Michel V. (2024)
The use of high expansion foam for stunning and killing pigs and poultry.
EFSA J. 2024 Jul 12;22(7):e8855. doi: 10.2903/j.efsa.2024.8855.
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Ba W, Nollet M, Yin C, Yu X, Wong S, Miao A, Beckwith EJ, Harding EC, Ma Y, Yustos R, Vyssotski AL, Wisden W, Franks NP. (2024)
A REM-active basal ganglia circuit that regulates anxiety.
Curr Biol. 2024 Jun 25:S0960-9822(24)00762-0. doi: 10.1016/j.cub.2024.06.010.
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Yasar TB, Gombkoto P, Vyssotski AL, Vavladeli AD, Lewis CM, Wu B, Meienberg L, Lundegardh V, Helmchen F, von der Behrens W, Yanik MF. (2024)
Months-long tracking of neuronal ensembles spanning multiple brain areas with Ultra-Flexible Tentacle Electrodes.
Nat Commun. 2024 Jun 6;15(1):4822. doi: 10.1038/s41467-024-49226-9.
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[Supplementary Materials]
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[Supplementary Movie 1]
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[Supplementary Movie 2]
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Chen Z, Han Y, Ma Z, Wang X, Xu S, Tang Y, Vyssotski AL, Si B, Zhan Y. (2024)
A prefrontal-thalamic circuit encodes social information for social recognition. Nat Commun. 2024 Feb 3;15(1):1036. doi: 10.1038/s41467-024-45376-y.
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Zaid E, Rainsford FW, Johnsson RD, Valcu M, Vyssotski AL, Meerlo P, Lesku JA. (2024)
Semelparous marsupials reduce sleep for sex. Curr Biol. 2024 Jan 11:S0960-9822(23)01764-5. doi: 10.1016/j.cub.2023.12.064.
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Sotelo MI, Markunas C, Kudlak T, Kohtz C, Vyssotski AL, Rothschild G, Eban-Rothschild A. (2023)
Neurophysiological and behavioral synchronization in group-living and sleeping mice. Curr Biol. 2023 Dec 14:S0960-9822(23)01652-4. doi: 10.1016/j.cub.2023.11.065.
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van Hasselt SJ, Coscia M, Allocca G, Vyssotski AL, Meerlo P. (2023) Seasonal variation in sleep time: jackdaws sleep when it is dark, but do they really need it?
J Comp Physiol B. 2023 Oct 3. doi: 10.1007/s00360-023-01517-1.
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Tossell K, Yu X, Giannos P, Anuncibay Soto B, Nollet M, Yustos R, Miracca G, Vicente M, Miao A, Hsieh B, Ma Y, Vyssotski AL, Constandinou T, Franks NP, Wisden W. (2023) Somatostatin neurons in prefrontal cortex initiate sleep-preparatory behavior and sleep via the preoptic and lateral hypothalamus.
Nat Neurosci. 2023 Sep 21. doi: 10.1038/s41593-023-01430-4.
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Kendall-Bar JM, Williams TM, Mukherji R, Lozano DA, Pitman JK, Holser RR, Keates T, Beltran RS, Robinson PW, Crocker DE, Adachi T, Lyamin OI, Vyssotski AL, Costa DP. (2023) Brain activity of diving seals reveals short sleep cycles at depth. Science. 2023 Apr 21;380(6642):260-265. doi: 10.1126/science.adf0566.
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[Supplementary Materials]
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[Supplementary Movie]
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[Supplementary Materials 1]
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[Supplementary Materials 2]
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Miracca G, Anuncibay-Soto B, Tossell K, Yustos R, Vyssotski AL, Franks NP, Wisden W. (2022) NMDA Receptors in the Lateral Preoptic Hypothalamus Are Essential for Sustaining NREM and REM Sleep. J Neurosci. 2022 Jul 6; 42(27):5389-5409. doi: 10.1523/JNEUROSCI.0350-21.2022.
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Kendall-Bar JM, Mukherji R, Nichols J, Lopez C, Lozano DA, Pitman JK, Holser RR, Beltran RS, Schalles M, Field CL, Johnson SP, Vyssotski AL, Costa DP, Williams TM (2022) Eavesdropping on the brain at sea: development of a surface-mounted system to detect weak electrophysiological signals from wild animals. Animal Biotelemetry 10, Article number: 16.
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[Suppl 1]
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[Suppl 2]
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[Suppl 3]
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[Suppl 4]
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[Suppl 5]
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[Suppl 6]
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[Suppl 7]
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[Suppl 8]
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[Suppl 9]
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[Suppl 10]
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[Suppl 11]
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[Suppl 12]
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Zaid E, Vyssotski AL, Lesku JA. (2022) Sleep architecture and regulation of male dusky antechinus, an Australian marsupial. Sleep. 2022 May 14:zsac114. doi: 10.1093/sleep/zsac114.
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[Supplement]
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Johnsson RD, Connelly F, Gaviraghi Mussoi J, Vyssotski AL, Cain KE, Roth TC 2nd, Lesku JA (2022) Sleep loss impairs cognitive performance and alters song output in Australian magpies. Sci Rep. 2022 Apr 22;12(1):6645. doi: 10.1038/s41598-022-10162-7.
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[SI 1]
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[SI 2]
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[SI 3]
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[SI 4]
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[SI 5]
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[SI 6]
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Harding EC, Ba W, Zahir R, Yu X, Yustos R, Hsieh B, Lignos L, Vyssotski AL, Merkle FT, Constandinou TG, Franks NP, Wisden W. (2021) Nitric Oxide Synthase Neurons in the Preoptic Hypothalamus Are NREM and REM Sleep-Active and Lower Body Temperature. Front Neurosci. 2021 Oct 14;15:709825. doi: 10.3389/fnins.2021.709825.
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Johnsson RD, Connelly F, Vyssotski AL, Roth TC, Lesku JA. (2021) Homeostatic regulation of NREM sleep, but not REM sleep, in Australian magpies.
Sleep. 2021 Aug 25:zsab218. doi: 10.1093/sleep/zsab218.
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Dong W, Chen H, Sit T, Han Y, Song F, Vyssotski AL, Gross CT, Si B, Zhan Y. (2021) Characterization of exploratory patterns and hippocampal-prefrontal network oscillations during the emergence of free exploration. Sci Bull (Beijing). 2021 Nov 15;66(21):2238-2250. doi: 10.1016/j.scib.2021.05.018.
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van Hasselt SJ, Hut RA, Allocca G, Vyssotski AL, Piersma T, Rattenborg NC, Meerlo P. (2021)
Cloud cover amplifies the sleep-suppressing effect of artificial light at night in geese.
Environ Pollut. 2021 Jan 7;273:116444. doi: 10.1016/j.envpol.2021.116444.
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van Hasselt SJ, Mekenkamp GJ, Komdeur J, Allocca G, Vyssotski AL, Piersma T, Rattenborg NC, Meerlo P. (2021)
Seasonal variation in sleep homeostasis in migratory geese: a rebound of NREM sleep following sleep deprivation in summer but not in winter.
Sleep. 2021 Apr 9;44(4):zsaa244. doi: 10.1093/sleep/zsaa244.
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van Hasselt SJ, Mekenkamp GJ, Komdeur J, Allocca G, Vyssotski AL, Piersma T, Rattenborg NC, Meerlo P. (2020) Seasonal variation in sleep homeostasis in migratory geese: a rebound of NREM sleep following sleep deprivation in summer but not in winter. Sleep. 2020 Nov 21:zsaa244. doi: 10.1093/sleep/zsaa244.
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Connelly, F., Johnsson, R.D., Aulsebrook, A.E., Mulder, R.A., Hall, M.L.,Vyssotski, A.L., Lesku, J.A. (2020) Urban noise restricts, fragments, and lightens sleep in Australian magpies. Environmental Pollution, https://doi.org/10.1016/j.envpol.2020.115484.
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Aulsebrook AE, Connelly F, Johnsson RD, Jones TM, Mulder RA, Hall ML, Vyssotski AL, Lesku JA. (2020) White and Amber Light at Night Disrupt Sleep Physiology in Birds. Curr Biol. 2020 Jul 17:S0960-9822(20)30937-4. doi: 10.1016/j.cub.2020.06.085.
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[Supplemental Information]
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[ Journal Cover ]
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[Video Abstract]
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Padovani L, Tesoriero C, Vyssotski A, Bentivoglio M, Chiamulera C. (2020) Hippocampal gamma oscillations by sucrose instrumental memory retrieval in rats across sleep/wake cycle. Neurosci Lett. 2020 Jul 16:135255. doi: 10.1016/j.neulet.2020.135255.
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Yu X, Ba W, Zhao G, Ma Y, Harding EC, Yin L, Wang D, Li H, Zhang P, Shi Y, Yustos R, Vyssotski AL, Dong H, Franks NP, Wisden W. (2020) Dysfunction of ventral tegmental area GABA neurons causes mania-like behavior. Mol Psychiatry. 2020 Jun 17. doi: 10.1038/s41380-020-0810-9.
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[Supplemental Information]
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van Hasselt SJ, Rusche M, Vyssotski AL, Verhulst S, Rattenborg NC, Meerlo P. (2020) The European Starling (Sturnus Vulgaris) Shows Signs of NREM Sleep Homeostasis but Has Very Little REM Sleep and No REM Sleep Homeostasis.
Sleep. 2020 Jun 15;43(6):zsz311. doi: 10.1093/sleep/zsz311.
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[Supplemental Information]
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Ma Y, Miracca G, Yu X, Harding EC, Miao A, Yustos R, Vyssotski AL, Franks NP, Wisden W. (2019) Galanin Neurons Unite Sleep Homeostasis and α2-Adrenergic Sedation. Curr Biol. 2019 Oct 7;29(19):3315-3322.e3. doi: 10.1016/j.cub.2019.07.087.
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Gent TC, Vyssotski AL, Detotto C, Isler S, Wehrle M and Bettschart-Wolfensberger Rl. (2019) Is xenon a suitable euthanasia agent for mice?, Veterinary Anaesthesia and Analgesia, https://doi.org/10.1016/j.vaa.2019.04.002
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[S1_Table]
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[S2_Table]
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[S3_Table]
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[S4_File]
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Allocca G, Ma S, Martelli D, Cerri M, Del Vecchio F, Bastianini S,
Zoccoli G, Amici R, Morairty SR, Aulsebrook AE, Blackburn S, Lesku JA,
Rattenborg NC, Vyssotski AL, Wams E, Porcheret K, Wulff K, Foster R,
Chan JKM, Nicholas CL, Freestone DR, Johnston LA and Gundlach AL
(2019) Validation of Somnivore, a Machine Learning Algorithm for Automated
Scoring and Analysis of Polysomnography Data. Front. Neurosci. 13:207.
doi: 10.3389/fnins.2019.00207
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Detotto C, Isler S, Wehrle M, Vyssotski AL, Bettschart-Wolfensberger R, Gent TC (2019) Nitrogen gas produces less behavioural and neurophysiological excitation than carbon dioxide in mice undergoing euthanasia. PLoS One 2019 Jan 31;14(1):e0210818. doi: 10.1371/journal.pone.0210818.
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[Supplemental Information]
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[Supplemental Information]
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Harding EC, Yu X, Miao A, Andrews N, Ma Y, Ye Z, Lignos L, Miracca G, Ba W, Yustos R,Vyssotski AL, Wisden W, Franks NP (2018) A neuronal hub binding sleep initiation and body cooling in response to a warm external stimulus. Curr Biol. 28, 1-11, July 23, doi.org/10.1016/j.cub.2018.05.054.
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[Supplemental Information]
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[Supplemental Information]
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Gent TC, Detotto C, Vyssotski AL, Bettschart-Wolfensberger R (2018) Epileptiform activity during inert gas euthanasia of mice. PLoS ONE 13(4), Apr 19: e0195872. https://doi.org/10.1371/
journal.pone.0195872
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Gelegen C, Miracca G, Ran MZ, Harding EC, Ye Z, Yu X, Tossel K, Houston CM, Yustos R, Hawkins ED, Vyssotski AL, Dong HL, Wisden W, and Franks N. (2018) Excitatory pathways from the lateral habenula enable propofor-induced sedation. Curr Biol. 28, 1-8, Feb 19, https://doi.org/10.1016/j.cub.2017.12.050
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[Supplemental Information]
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[Supporting Information]
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EFSA AHAW Panel (EFSA Panel on Animal Health and Welfare), More S, Bicout D, Bøtner A, Butterworth A, Calistri P, Depner K, Edwards S, Garin-Bastuji B, Good M, Gortazar Schmidt C, Miranda MA, Nielsen SS, Sihvonen L, Spoolder H, Willeberg P, Raj M, Thulke H-H, Velarde A, Vyssotski A, Winckler C, Cortiñas Abrahantes J, Garcia A, Muñoz Guajardo I, Zancanaro G and Michel V. (2017) Scientific Opinion on the low atmospheric pressure system for stunning broiler chickens. EFSA Journal 2017;15(12):5056, 86 pp. https://doi.org/10.2903/j.efsa.2017.5056
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[Supplemental Data]
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Scriba MF, Dreiss AN, Henry I, Be´ziers P, Ruppli C, Ifrid E, Ducouret P, Da Silva A, Monstiers B, Vyssotski AL, Rattenbord NC, Roulin A. (2017) Nocturnal, diurnal and bimodal patterns of locomotion, sibling interactions and sleep in nestling Barn Owls. J. Ornithol. 2017 May 8. doi: 10.1007/s10336-017-1458-3.
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[Supplemental Data]
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Jovalekic A, Cave-Lopez S, Canopoli A, Ondracek JM, Nager A, Vyssotski AL, Hahnloser RHR. (2017) A lightweight feedback-controlled microdrive for chronic neural recordings. J. Neural Eng. 2017 Apr;14(2):026006. doi: 10.1088/1741-2552/aa5848. Epub 2017 Jan 10.
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[Supplemental Data]
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[Supplemental Data]
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[S1 Fig]
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[S1_Data]
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[S1 Text]
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[ Main Journal Page ]
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[Supplementary Information]
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[Supplementary Movie 1 (10 min Flight)]
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[Supplementary Movie 2 (Frigatebird 13)]
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[Supplementary Movie 3 (Frigatebird 10)]
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[Supplementary Movie 4 (Frigatebird Drop)]
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Yu X. Ye Z, Huston CM, Zecharia AY, Ma Y, Zhang Z, Uygun DS, Parker S, Vyssotski AL, Yustos R, Franks NP, Brickley SG, Wisden W (2015) Wakefulness is governed by GABA and histamine cotransmission. Neuron. http://dx.doi.org/10.1016/j.neuron.2015.06.003
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[Supplemental Data]
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Shine R, Amiel J, Munn AJ, Stewart M, Vyssotski AL, Lesku JA (2015) Is "cooling then freezing" a humane way to kill amphibians and reptiles? Biology Open 2015 May; 00, 1-4 doi: 10.1242/bio.012179.
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[Supplemental Data]
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Yu X, Zecharia A, Zhang Z, Yang Q, Yustos R, Jager P, Vyssotski AL, Maywood ES, Chesham JE, Ma Y, Brickley SG, Hastings MH, Franks NP, Wisden W (2014) Circadian Factor BMAL1 in Histaminergic Neurons Regulates Sleep Architecture. Curr Biol. 24(23): 2838-2844.
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[Supplemental Data]
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Anisimov VN, Herbst JA, Abramchuk AN, Latanov AV, Hahnloser RH, Vyssotski AL (2014) Reconstraction of vocal interactons in a group of small songbirds. Nat Methods. 2014 Nov; 11(11):1135-7. doi: 10.1038/nmeth.3114.
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[Supplementary Text]
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[Supplementary Video 1 (4 Males)]
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[Supplementary Video 2 (Juvenile 40dph Backpack)]
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[Supplementary Video 3 (Juvenile Flight Backpack)]
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[Supplementary Video 4 (Juvenile 39dph)]
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[Supplementary Video 5 (Male Female)]
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[Supplementary Software]
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[ Journal Cover ]
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[In This Issue]
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[The Author File]
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[Supplementary Software updated 18.09.2016]
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Baker R, Gent TC, Yang Q, Parker S, Vyssotski AL, Wisden W, Brickley SG, Franks NP. (2014) Altered Activity in the Central Medial Thalamus Precedes Changes in the Neocortex during Transitions into Both Sleep and Propofol Anesthesia. J Neurosci. 2014 Oct 1;34(40):13326-35. doi: 10.1523/JNEUROSCI.1519-14.2014.
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[ Supporting Information ]
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[ Supporting Information ]
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[ Supplementary Information ]
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[Google Earth: Sample Flight Path]
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Zecharia A.Y., Yu X., Götz T., Ye Z., Carr D.R., Wulff P., Bettler B., Vyssotski A.L., Brickley S.G., Franks N.P., and Wisden W. (2012) GABAergic inhibition of histaminergic neurons regulates active waking but not the sleep-wake switch or propofol-induced loss of consciousness. J. Neurosci. 32(38):13062-13075.
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[ Supplemental Text ]
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[Google Earth: Wandering Albatross Dynamic Soaring]
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[ Supplemental Text ]
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[ Supplemental Movie ]
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[ Supplemental Audio ]
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[ Supplemental Database ]
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Scheffzük C., Kukushka V.I., Vyssotski A.L., Draguhn A., Tort A.B.L. and Brankack J. (2011) Selective coupling between theta phase and neocortical fast gamma oscillations during REM-sleep in mice. PLoS One, 6(12):e28489.
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[ Figures S1 - S6 ]
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[ Supplemental Text ]
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Lesku J.A., Meyer L.C., Fuller A., Maloney S.K., Dell'Omo G., Vyssotski A.L. and Rattenborg N.C. (2011) Ostriches sleep like platypuses. PLoS One, 6(8):e23203.
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[ Figure S1 ]
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[ Figure S2 ]
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[ Supplemental Movie ]
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[ Supplemental Text ]
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Tsoar A., Nathan R., Bartan Y., Vyssotski A., Dell'Omo G. and Ulanovsky N. (2011) Large-scale navigational map in a mammal. Proc Natl Acad Sci USA, 108(37): E718-E724.
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[ Summary ]
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[ Supplemental Data ]
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[ Supplemental Movie ]
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[ Commentary by Edvard I. Moser ]
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Daan S., Spoelstra K., Albrecht U., Schmutz I., Daan M., Daan B., Rienks F., Poletaeva I., Dell'Omo G., Vyssotski A., and Lipp H.-P. (2011) Lab mice in the field: unorthodox daily activity and effects of a dysfunctional circadian clock allele. J Biol Rhythms, 26(2): 118-29.
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[ Supplemental Data ]
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Lesku J.A., Vyssotski A.L., Martinez-Gonzalez D., Witzeck C., and Rattenborg N.C. (2011) Local sleep homeostasis in the avian brain: convergence of sleep function in mammals and birds? Proc Biol Sci. 278: 2419-28.
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[ Supplemental Data ]
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Brankack J., Kukushka V.I., Vyssotski A.L., and Draguhn A. (2010) EEG gamma frequency and sleep-wake scoring in mice: Comparing two types of supervised classifiers. Brain Res. 1322: 59-71
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Pang D.S., Robledo C.J., Carr D.C., Gent T.C., Vyssotski A.L., Caley A, Zecharia A., Wisden W., Brickley S.G., and Franks N.P. (2009) An unexpected role for TASK-3 potassium channels in network oscillations with implications for sleep mechanisms and anesthetic action. Proc Natl Acad Sci USA, 106(51): 17546-17551
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Vyssotski A.L., Dell'Omo G., Dell'Ariccia G., Abramchuk A.N., Serkov A.N., Latanov A.V., Loizzo A., Wolfer D.P., and Lipp H.-P. (2009) EEG responses to visual landmarks in flying pigeons. Curr Biol. 19(14): 1159-1166.
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[ Supplemental Data ]
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Publicity: Science NOW
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Traugott J., Dell'Omo G., Vyssotski A.L., Odijk D., and Sachs D. (2008) A time-relative approach for precise positioning with a miniaturized L1 GPS logger. ION GNSS 21st International Technical Meeting of Satellite Division, 16-19, September 2008, Savannah, GA: 1883-1894
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[ Supplemental Data ]
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Publicity: Science NOW
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Ben Abdallah N.M., Slomianka L., Vyssotski A.L., and Lipp H.-P. (2008) Early age-related changes in adult hippocampal neurogenesis in C57
mice, Neurobiol Aging, doi:10.1016/j.neurobiolaging.2008.03.002
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Vyssotski A.L., Serkov A.N., Itskov P.M., Dell'Omo G., Latanov A.V., Wolfer D.P., and Lipp H.-P. (2006) Miniature neurologgers for flying pigeons: multichannel EEG and action and field potentials in combination with GPS recording. J Neurophysiol 95: 1263-1273.
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Galsworthy M.J., Amrein I., Kuptsov P.A., Poletaeva I.I., Zinn P., Rau A.E., Vyssotski A.L., and Lipp H.-P. (2005) A comparison of wild-caught wood mice and bank voles in the Intellicage: assessing exploration, daily activity patterns and place learning paradigms. Behavioural Brain Research, 157(2), 211-217
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[ Supplemental Data ]
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Vysotskii A.L., Vysotskii D.L. (1996). Improved evaluation of the parameters of linearizable relationships. - Biophysics, 41(3), 775-777.
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